grassp.pl.tagm_map_pca_ellipses

grassp.pl.tagm_map_pca_ellipses#

tagm_map_pca_ellipses(adata, stds=[1, 2, 3], dimensions=None, components=None, ax=None, **kwargs)[source]#

Plot the PCA ellipses of the TAGM map of the adata object.

Parameters:
adata AnnData

The adata object.

ax Optional[Axes] (default: None)

The axis to plot the TAGM map on.

stds List[int]

dimensions tuple[int, int] | None

components str | Sequence[str] | None