grassp.tl.align_adatas

Contents

grassp.tl.align_adatas#

align_adatas(data_list, intersect_obs=True, intersect_var=True)[source]#

Align multiple AnnData objects by intersecting their observations and variables.

Parameters:
data_list List[AnnData]

List of AnnData objects to align

intersect_obs bool (default: True)

Whether to intersect observations (rows) across all objects

intersect_var bool (default: True)

Whether to intersect variables (columns) across all objects

Return type:

List[AnnData]

Returns:

list : AnnData List of aligned AnnData objects with matching observations and variables