grassp.pp.MARKER_COLORS

Contents

grassp.pp.MARKER_COLORS#

MARKER_COLORS = {'0': '#BEBEBE', '14-3-3 scaffold': '#4D4D4D', '14-3-3_scaffold': '#4D4D4D', '19S Proteasome': '#9F36B7', '20S Proteasome': '#8C289E', '37S Ribosome': '#CF1172', '40S Ribosome': '#C30566', '54S Ribosome': '#B7005A', '60S Ribosome': '#AB004E', 'Acidocalcisomes': '#FFED6F', 'Actin Cytoskeleton': '#F4A6C1', 'Actin binding proteins': '#F4A6C1', 'Actin-binding protein': '#F4A6C1', 'Apical 1': '#FDB462', 'Apical 2': '#FCA452', 'Apicoplast': '#FB8072', 'Cell cortex': '#202b39', 'Cell membrane': '#7A8DA6', 'Centrosome': '#1F78B4', 'Cilium': '#00847F', 'Cytoplasm': '#1B9E9E', 'Cytoplasmic': '#1B9E9E', 'Cytoskeleton': '#00CFFF', 'Cytosol': '#1B9E9E', 'Cytosolic': '#1B9E9E', 'Dense Granules': '#B3DE69', 'ECM': '#E5C494', 'ER': '#7A4A2E', 'ER 1': '#C89C00', 'ER 2': '#BC9000', 'ER High Curvature': '#B08400', 'ER Lumen': '#E0B400', 'ER Membrane': '#D4A800', 'ER-Golgi intermediate compartment': '#E0B400', 'ERGIC': '#E0B400', 'Early endosome': '#00FF44', 'Endomembrane Vesicles': '#FFFFB3', 'Endoplasmic reticulum': '#7A4A2E', 'Endoplasmic reticulum membrane': '#D4A800', 'Endoplasmic reticulum-Golgi intermediate compartment': '#E0B400', 'Endosome': '#6DBE45', 'Envelope': '#D5B484', 'Flagellum 1': '#CCEBC5', 'Glycosomes': '#FDB462', 'Golgi': '#2AA1D8', 'Golgi apparatus': '#2AA1D8', 'IMC': '#BC80BD', 'Intraflagellar Transport': '#BCDB95', 'Large Protein Complex': '#6E6896', 'Lipid droplet': '#FFB300', 'Lipid droplets': '#FFB300', 'Lysosome': '#E41A1C', 'Membrane': '#7A8DA6', 'Micronemes': '#FCCDE5', 'Microtubule Structures 1': '#80B1D3', 'Microtubule Structures 2': '#70A1C3', 'Mito': '#F28E1C', 'Mitochondria': '#F28E1C', 'Mitochondria - Matrix': '#DA6E18', 'Mitochondria - Membranes': '#B63E12', 'Mitochondria Matrix': '#DA6E18', 'Mitochondria Membrane': '#B63E12', 'Mitochondria Membranes': '#B63E12', 'Mitochondrion': '#F28E1C', 'Mitochondrion - IM': '#F28E1C', 'Mitochondrion - Matrix': '#DA6E18', 'Mitochondrion - Matrix 1': '#DA6E18', 'Mitochondrion - Matrix 2': '#C24E14', 'Mitochondrion - Membranes': '#B63E12', 'Mitochondrion - OM': '#E67E1A', 'Mitochondrion - Soluble': '#DA6E18', 'Mitochondrion Membrane': '#B63E12', 'Mitochondrion Membranes': '#B63E12', 'N/A': '#BEBEBE', 'NA': '#BEBEBE', 'None': '#BEBEBE', 'Nuclear': '#C9A27C', 'Nuclear Pore Complex': '#A1867C', 'Nuclear membrane': '#A3784D', 'Nuclear pore': '#8D787C', 'Nuclear pore complex': '#8D787C', 'Nucleolar': '#6A3D9A', 'Nucleolus': '#6A3D9A', 'Nucleoplasm-1': '#6A3D9A', 'Nucleoplasm-2': '#5E3588', 'Nucleus': '#C9A27C', 'Nucleus - Chromatin': '#C9A27C', 'Nucleus - Non-Chromatin': '#B5947C', 'Nucleus membrane': '#A3784D', 'P-body': '#333333', 'PM': '#7A8DA6', 'PM - Integral': '#7A8DA6', 'PM - Peripheral 1': '#6A7D96', 'PM - Peripheral 2': '#5A6D86', 'Peroxisome': '#3F1861', 'Plasma membrane': '#7A8DA6', 'Plastid': '#66C2A5', 'Proteasome': '#9F36B7', 'Proteasome Regulatory Particle': '#8C289E', 'Protein Complex': '#8983B5', 'RNA granule': '#559529', 'RNA granules': '#559529', 'Recycling endosome': '#BEFF5E', 'Rhoptries 1': '#D9D9D9', 'Rhoptries 2': '#C9C9C9', 'Ribonucleoproteins 1': '#9F0042', 'Ribosome': '#E7298A', 'Ribosome - Complexes': '#DB1D7E', 'Royal Blue': '#344B9E', 'SG: 14-3-3': '#4D4D4D', 'STR': '#8DA0CB', 'Secretory - Endocytic 1': '#8DD3C7', 'Secretory - Endocytic 2': '#7DC3B7', 'Secretory - Endocytic 3': '#6DB3A7', 'Stress granule': '#559529', 'Stress granules': '#559529', 'TGN': '#2F2F2F', 'THY': '#46A285', 'Translation': '#E7298A', 'Tubulin Cytoskeleton': '#0F8E8E', 'Vacuole': '#56B295', 'ambiguous': '#BEBEBE', 'miscellaneous': '#BEBEBE', 'nan': '#BEBEBE', 'not annotated': '#BEBEBE', 'not assigned': '#BEBEBE', 'not determined': '#BEBEBE', 'not-annotated': '#BEBEBE', 'notassigned': '#BEBEBE', 'novel': '#BEBEBE', 'null': '#BEBEBE', 'other': '#BEBEBE', 'trans-Golgi': '#2F2F2F', 'trans-Golgi network': '#2F2F2F', 'unannotated': '#BEBEBE', 'unassigned': '#BEBEBE', 'unclassified': '#BEBEBE', 'undefined': '#BEBEBE', 'undetermined': '#BEBEBE', 'unidentified': '#BEBEBE', 'unknown': '#BEBEBE', 'unlabeled': '#BEBEBE', 'unmarked': '#BEBEBE', 'unmeasurable': '#BEBEBE', 'unspecified': '#BEBEBE'}#

dict() -> new empty dictionary dict(mapping) -> new dictionary initialized from a mapping object’s

(key, value) pairs

dict(iterable) -> new dictionary initialized as if via:

d = {} for k, v in iterable:

d[k] = v

dict(**kwargs) -> new dictionary initialized with the name=value pairs

in the keyword argument list. For example: dict(one=1, two=2)